Characterizing and Filtering Species Occurrence Data
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Documentation for package ‘occTest’ version 0.1.1
Help Pages
| .addmainfields2 | Add main fields |
| .ah2sp | Convert Alpha Hull object into a shapefile |
| .cc_round_occTest | Flag records with regular pattern interval |
| .check.geospatial.data | Checks on the projection of the spatial data |
| .checkdatastr2 | Check data structure |
| .checkfields | Checking main fields |
| .checkPolygonsGEOS2 | Check polygon geometry |
| .coords2country | Extracts country ISO3 based on locations |
| .getSRTM | Download SRTM elevation raster |
| .status.tracker.and.escaping | Workflow status tracker |
| ctryToIso3 | Convert country names to ISO3 codes |
| defaultSettings | load default settings for occTest |
| geoEnvAccuracy | Coordinate accuracy |
| get_occTest_settings | Get occTest Settings |
| landSeaFilter | Filter occurrence by habitat (terrestrial/non-Terrestrial) |
| lazylogic | a lazy logic omitting NAs |
| minimalSettings | Load minimal settings for occTest |
| occFilter | Filter occurrence records from occTest outputs |
| occSimpFilter | Runs tests and validates data |
| occTest | Occurrence tests |
| plot.occTest | Display the filtering process |
| rm.all | Remove all objects |
| setTableNames | set table names internally |
| setTestBlocks | Set the tests to run |
| setTestTypes | Set the tests to run |
| showTableNames | Print naming conventions in occTest |
| showTests | Show implemented tests and types of tests |
| splitSpname | Split joined species name |