Index

C D E G H I M N O P R S T U V W
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C

checkAccess(Path, AccessMode...) - Method in class org.broadinstitute.http.nio.HttpFileSystemProvider

checkAccess(Path, AccessMode...) - Method in class org.broadinstitute.http.nio.HttpsFileSystemProvider

close() - Method in class org.broadinstitute.http.nio.HttpSeekableByteChannel

copy(Path, Path, CopyOption...) - Method in class org.broadinstitute.http.nio.HttpFileSystemProvider

copy(Path, Path, CopyOption...) - Method in class org.broadinstitute.http.nio.HttpsFileSystemProvider

createDirectory(Path, FileAttribute...) - Method in class org.broadinstitute.http.nio.HttpFileSystemProvider

Unsupported method.

createDirectory(Path, FileAttribute...) - Method in class org.broadinstitute.http.nio.HttpsFileSystemProvider

Unsupported method.

D

DEFALT_RETRYABLE_MESSAGES - Static variable in class org.broadinstitute.http.nio.RetryHandler

the default set of exception messages which are retried when encountered

DEFAULT_RETRY_SETTINGS - Static variable in record class org.broadinstitute.http.nio.HttpFileSystemProviderSettings

The default retry settings, these are a good basis for retry handling

DEFAULT_RETRYABLE_EXCEPTIONS - Static variable in class org.broadinstitute.http.nio.RetryHandler

default set of exception types which will be retried when encountered

DEFAULT_RETRYABLE_HTTP_CODES - Static variable in class org.broadinstitute.http.nio.RetryHandler

default set of HTTP codes which will be retried

DEFAULT_SETTINGS - Static variable in record class org.broadinstitute.http.nio.HttpFileSystemProviderSettings

default settings which will be used unless they are reset

delete(Path) - Method in class org.broadinstitute.http.nio.HttpFileSystemProvider

Unsupported method.

delete(Path) - Method in class org.broadinstitute.http.nio.HttpsFileSystemProvider

Unsupported method.

E

equals(Object) - Method in record class org.broadinstitute.http.nio.HttpFileSystemProviderSettings

Indicates whether some other object is "equal to" this one.

equals(Object) - Method in record class org.broadinstitute.http.nio.HttpFileSystemProviderSettings.RetrySettings

Indicates whether some other object is "equal to" this one.

ExceptionCauseIterator - Class in org.broadinstitute.http.nio.utils

Iterate through the cause chain of a Throwable to examine all the causes in turn Bounded by ExceptionCauseIterator.MAX_DEPTH in order to prevent infinite loops.

ExceptionCauseIterator(Throwable) - Constructor for class org.broadinstitute.http.nio.utils.ExceptionCauseIterator

exists(URI, HttpFileSystemProviderSettings) - Static method in class org.broadinstitute.http.nio.utils.HttpUtils

Check if an URI exists.

G

get() - Method in interface org.broadinstitute.http.nio.RetryHandler.IOSupplier

Equivalent to Supplier.get()

getClient(HttpFileSystemProviderSettings) - Static method in class org.broadinstitute.http.nio.utils.HttpUtils

Get an HttpClient built wth appropriate settings.

getFileAttributeView(Path, Class, LinkOption...) - Method in class org.broadinstitute.http.nio.HttpFileSystemProvider

getFileAttributeView(Path, Class, LinkOption...) - Method in class org.broadinstitute.http.nio.HttpsFileSystemProvider

getFileStore(Path) - Method in class org.broadinstitute.http.nio.HttpFileSystemProvider

getFileStore(Path) - Method in class org.broadinstitute.http.nio.HttpsFileSystemProvider

getFileSystem(URI) - Method in class org.broadinstitute.http.nio.HttpFileSystemProvider

getFileSystem(URI) - Method in class org.broadinstitute.http.nio.HttpsFileSystemProvider

getMaxRetries() - Method in class org.broadinstitute.http.nio.RetryHandler

getPath(URI) - Method in class org.broadinstitute.http.nio.HttpFileSystemProvider

getPath(URI) - Method in class org.broadinstitute.http.nio.HttpsFileSystemProvider

getResponseCode() - Method in exception class org.broadinstitute.http.nio.UnexpectedHttpResponseException

getRetries() - Method in exception class org.broadinstitute.http.nio.OutOfRetriesException

getScheme() - Method in class org.broadinstitute.http.nio.HttpFileSystemProvider

getScheme() - Method in class org.broadinstitute.http.nio.HttpsFileSystemProvider

getSettings() - Static method in class org.broadinstitute.http.nio.HttpFileSystemProvider

getSettings() - Static method in class org.broadinstitute.http.nio.HttpsFileSystemProvider

getTotalWaitTime() - Method in exception class org.broadinstitute.http.nio.OutOfRetriesException

H

hashCode() - Method in record class org.broadinstitute.http.nio.HttpFileSystemProviderSettings

Returns a hash code value for this object.

hashCode() - Method in record class org.broadinstitute.http.nio.HttpFileSystemProviderSettings.RetrySettings

Returns a hash code value for this object.

hasNext() - Method in class org.broadinstitute.http.nio.utils.ExceptionCauseIterator

HTTP_PATH_CHARSET - Static variable in class org.broadinstitute.http.nio.utils.HttpUtils

Charset for path component of HTTP/S URL.

HTTP_PATH_SEPARATOR_CHAR - Static variable in class org.broadinstitute.http.nio.utils.HttpUtils

Separator char for path component of HTTP/S URL.

HTTP_PATH_SEPARATOR_STRING - Static variable in class org.broadinstitute.http.nio.utils.HttpUtils

Separator String for path component of HTTP/S URL.

HttpFileSystemProvider - Class in org.broadinstitute.http.nio

Read-only FileSystemProvider for HTTP.

HttpFileSystemProvider() - Constructor for class org.broadinstitute.http.nio.HttpFileSystemProvider

HttpFileSystemProviderSettings - Record Class in org.broadinstitute.http.nio

Settings that control the behavior of newly instantiated Http(s)FileSystems

HttpFileSystemProviderSettings(Duration, HttpClient.Redirect, HttpFileSystemProviderSettings.RetrySettings) - Constructor for record class org.broadinstitute.http.nio.HttpFileSystemProviderSettings

Creates an instance of a HttpFileSystemProviderSettings record class.

HttpFileSystemProviderSettings.RetrySettings - Record Class in org.broadinstitute.http.nio

Settings which control the behavior of http retries

HttpSeekableByteChannel - Class in org.broadinstitute.http.nio

Implementation for a SeekableByteChannel for URL open as a connection.

HttpSeekableByteChannel(URI) - Constructor for class org.broadinstitute.http.nio.HttpSeekableByteChannel

create a new seekable channel with default setttings at beggining of the file

HttpSeekableByteChannel(URI, long) - Constructor for class org.broadinstitute.http.nio.HttpSeekableByteChannel

Create a new seekable channel with default setttins and seek to the given position

HttpSeekableByteChannel(URI, HttpFileSystemProviderSettings, long) - Constructor for class org.broadinstitute.http.nio.HttpSeekableByteChannel

Create a new seekable channel which reads from the requested URI

HttpsFileSystemProvider - Class in org.broadinstitute.http.nio

Read-only FileSystemProvider for HTTPS.

HttpsFileSystemProvider() - Constructor for class org.broadinstitute.http.nio.HttpsFileSystemProvider

HttpUtils - Class in org.broadinstitute.http.nio.utils

Utility class for working with HTTP/S connections and URLs.

I

IncompatibleResponseToRangeQueryException - Exception Class in org.broadinstitute.http.nio

indicates that a partial file was returned when the whole file was expecteted or vice a versa

IncompatibleResponseToRangeQueryException(int, String) - Constructor for exception class org.broadinstitute.http.nio.IncompatibleResponseToRangeQueryException

isHidden(Path) - Method in class org.broadinstitute.http.nio.HttpFileSystemProvider

isHidden(Path) - Method in class org.broadinstitute.http.nio.HttpsFileSystemProvider

isOpen() - Method in class org.broadinstitute.http.nio.HttpSeekableByteChannel

isRetryable(Exception) - Method in class org.broadinstitute.http.nio.RetryHandler

isSameFile(Path, Path) - Method in class org.broadinstitute.http.nio.HttpFileSystemProvider

isSameFile(Path, Path) - Method in class org.broadinstitute.http.nio.HttpsFileSystemProvider

iterator() - Method in class org.broadinstitute.http.nio.utils.ExceptionCauseIterator

M

MAX_DEPTH - Static variable in class org.broadinstitute.http.nio.utils.ExceptionCauseIterator

The maximum depth of causes to explore before stopping

maxRetries() - Method in record class org.broadinstitute.http.nio.HttpFileSystemProviderSettings.RetrySettings

Returns the value of the maxRetries record component.

move(Path, Path, CopyOption...) - Method in class org.broadinstitute.http.nio.HttpFileSystemProvider

Unsupported method.

move(Path, Path, CopyOption...) - Method in class org.broadinstitute.http.nio.HttpsFileSystemProvider

Unsupported method.

N

newByteChannel(Path, Set, FileAttribute...) - Method in class org.broadinstitute.http.nio.HttpFileSystemProvider

newByteChannel(Path, Set, FileAttribute...) - Method in class org.broadinstitute.http.nio.HttpsFileSystemProvider

newDirectoryStream(Path, DirectoryStream.Filter) - Method in class org.broadinstitute.http.nio.HttpFileSystemProvider

newDirectoryStream(Path, DirectoryStream.Filter) - Method in class org.broadinstitute.http.nio.HttpsFileSystemProvider

newFileSystem(URI, Map) - Method in class org.broadinstitute.http.nio.HttpFileSystemProvider

newFileSystem(URI, Map) - Method in class org.broadinstitute.http.nio.HttpsFileSystemProvider

next() - Method in class org.broadinstitute.http.nio.utils.ExceptionCauseIterator

nonNull(T, Supplier) - Static method in class org.broadinstitute.http.nio.utils.Utils

Throws an IllegalArgumentException if the object is null.

O

org.broadinstitute.http.nio - package org.broadinstitute.http.nio

HTTP/S FileSystem provider for Java NIO.2

org.broadinstitute.http.nio.utils - package org.broadinstitute.http.nio.utils

OutOfRetriesException - Exception Class in org.broadinstitute.http.nio

Indicates a failure which could be retried but was not because all allowed retries were exhausted.

OutOfRetriesException(int, Duration, Throwable) - Constructor for exception class org.broadinstitute.http.nio.OutOfRetriesException

P

position() - Method in class org.broadinstitute.http.nio.HttpSeekableByteChannel

position(long) - Method in class org.broadinstitute.http.nio.HttpSeekableByteChannel

R

read(ByteBuffer) - Method in class org.broadinstitute.http.nio.HttpSeekableByteChannel

readAttributes(Path, Class, LinkOption...) - Method in class org.broadinstitute.http.nio.HttpFileSystemProvider

readAttributes(Path, Class, LinkOption...) - Method in class org.broadinstitute.http.nio.HttpsFileSystemProvider

readAttributes(Path, String, LinkOption...) - Method in class org.broadinstitute.http.nio.HttpFileSystemProvider

readAttributes(Path, String, LinkOption...) - Method in class org.broadinstitute.http.nio.HttpsFileSystemProvider

readWithoutPerturbingTheBufferIfAnErrorOccurs(ByteBuffer, ReadableByteChannel) - Static method in class org.broadinstitute.http.nio.HttpSeekableByteChannel

Performs the equivalent of a channel.read(buf) operation but in the case of an exception the state of the input buffer is not adversely impacted.

redirect() - Method in record class org.broadinstitute.http.nio.HttpFileSystemProviderSettings

Returns the value of the redirect record component.

retryableExceptions() - Method in record class org.broadinstitute.http.nio.HttpFileSystemProviderSettings.RetrySettings

Returns the value of the retryableExceptions record component.

retryableHttpCodes() - Method in record class org.broadinstitute.http.nio.HttpFileSystemProviderSettings.RetrySettings

Returns the value of the retryableHttpCodes record component.

retryableMessages() - Method in record class org.broadinstitute.http.nio.HttpFileSystemProviderSettings.RetrySettings

Returns the value of the retryableMessages record component.

RetryHandler - Class in org.broadinstitute.http.nio

Simple counter class to keep track of retry and reopen attempts when StorageExceptions are encountered.

RetryHandler(int, Collection, Collection, Collection, Predicate, URI) - Constructor for class org.broadinstitute.http.nio.RetryHandler

Create a CloudStorageRetryHandler with the maximum retries and reopens set to different values.

RetryHandler(HttpFileSystemProviderSettings.RetrySettings, URI) - Constructor for class org.broadinstitute.http.nio.RetryHandler

RetryHandler.IORunnable - Interface in org.broadinstitute.http.nio

invalid input: '{@linkplain /*missing*/}' equivalent which can throw IOException

RetryHandler.IOSupplier<T> - Interface in org.broadinstitute.http.nio

Supplier equivalent which can throw IOException

retryPredicate() - Method in record class org.broadinstitute.http.nio.HttpFileSystemProviderSettings.RetrySettings

Returns the value of the retryPredicate record component.

retrySettings() - Method in record class org.broadinstitute.http.nio.HttpFileSystemProviderSettings

Returns the value of the retrySettings record component.

RetrySettings(int, Collection, Collection, Collection, Predicate) - Constructor for record class org.broadinstitute.http.nio.HttpFileSystemProviderSettings.RetrySettings

Settings to control retry behavior

run() - Method in interface org.broadinstitute.http.nio.RetryHandler.IORunnable

equivalent to Runnable.run()

runWithRetries(RetryHandler.IORunnable) - Method in class org.broadinstitute.http.nio.RetryHandler

A function to run and potentially retry if an error occurs and meets the retry criteria Note that functions may be run repeatedly so any state which is changed during an unsuccessful attempt must not poison the class.

runWithRetries(RetryHandler.IOSupplier) - Method in class org.broadinstitute.http.nio.RetryHandler

A function to run and potentially retry if an error occurs and meets the retry criteria Note that functions may be run repeatedly so any state which is changed during an unsuccessful attempt must not poison the class.

S

SCHEME - Static variable in class org.broadinstitute.http.nio.HttpFileSystemProvider

Scheme for HTTP files.

SCHEME - Static variable in class org.broadinstitute.http.nio.HttpsFileSystemProvider

Scheme for HTTPS files.

setAttribute(Path, String, Object, LinkOption...) - Method in class org.broadinstitute.http.nio.HttpFileSystemProvider

setAttribute(Path, String, Object, LinkOption...) - Method in class org.broadinstitute.http.nio.HttpsFileSystemProvider

setSettings(HttpFileSystemProviderSettings) - Static method in class org.broadinstitute.http.nio.HttpFileSystemProvider

override the existing settings

setSettings(HttpFileSystemProviderSettings) - Static method in class org.broadinstitute.http.nio.HttpsFileSystemProvider

override the existing settings

ShouldNotHappenException(String) - Constructor for exception class org.broadinstitute.http.nio.utils.Utils.ShouldNotHappenException

Constructor.

ShouldNotHappenException(Throwable) - Constructor for exception class org.broadinstitute.http.nio.utils.Utils.ShouldNotHappenException

Constructor.

size() - Method in class org.broadinstitute.http.nio.HttpSeekableByteChannel

T

timeout() - Method in record class org.broadinstitute.http.nio.HttpFileSystemProviderSettings

Returns the value of the timeout record component.

toString() - Method in class org.broadinstitute.http.nio.HttpFileSystemProvider

toString() - Method in class org.broadinstitute.http.nio.HttpsFileSystemProvider

toString() - Method in record class org.broadinstitute.http.nio.HttpFileSystemProviderSettings.RetrySettings

Returns a string representation of this record class.

toString() - Method in record class org.broadinstitute.http.nio.HttpFileSystemProviderSettings

Returns a string representation of this record class.

truncate(long) - Method in class org.broadinstitute.http.nio.HttpSeekableByteChannel

tryOnceThenWithRetries(RetryHandler.IOSupplier, RetryHandler.IOSupplier) - Method in class org.broadinstitute.http.nio.RetryHandler

First attempt the runFirst function.

U

UnexpectedHttpResponseException - Exception Class in org.broadinstitute.http.nio

thrown when we recieve an unexpected response code from an http request which is not otherwise specially handled

UnexpectedHttpResponseException(int, String) - Constructor for exception class org.broadinstitute.http.nio.UnexpectedHttpResponseException

Utils - Class in org.broadinstitute.http.nio.utils

Generic utility methods.

Utils.ShouldNotHappenException - Exception Class in org.broadinstitute.http.nio.utils

RuntimeException for parts of the code that should not happen.

V

validateArg(boolean, String) - Static method in class org.broadinstitute.http.nio.utils.Utils

W

write(ByteBuffer) - Method in class org.broadinstitute.http.nio.HttpSeekableByteChannel

C D E G H I M N O P R S T U V W
All Classes and Interfaces|All Packages|Constant Field Values|Serialized Form