logistic.hpp

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#ifndef __STAN__PROB__DISTRIBUTIONS__UNIVARIATE__CONTINUOUS__LOGISTIC_HPP__
#define __STAN__PROB__DISTRIBUTIONS__UNIVARIATE__CONTINUOUS__LOGISTIC_HPP__
 
#include <stan/agrad.hpp>
#include <stan/math/error_handling.hpp>
#include <stan/math/special_functions.hpp>
#include <stan/meta/traits.hpp>
#include <stan/prob/constants.hpp>
#include <stan/prob/traits.hpp>
 
namespace stan {
  namespace prob {
 
    // Logistic(y|mu,sigma)    [sigma > 0]
    // FIXME: document
    template <bool propto,
              typename T_y, typename T_loc, typename T_scale, 
              class Policy>
    typename return_type<T_y,T_loc,T_scale>::type
    logistic_log(const T_y& y, const T_loc& mu, const T_scale& sigma, 
                 const Policy&) {
      static const char* function = "stan::prob::logistic_log(%1%)";
      
      using stan::math::check_positive;
      using stan::math::check_finite;
      using stan::math::check_consistent_sizes;
      using stan::math::value_of;
      using stan::prob::include_summand;
      
      // check if any vectors are zero length
      if (!(stan::length(y) 
            && stan::length(mu) 
            && stan::length(sigma)))
        return 0.0;
 
 
      // set up return value accumulator
      double logp(0.0);
 
      // validate args (here done over var, which should be OK)      
      if (!check_finite(function, y, "Random variable", &logp, Policy()))
        return logp;
      if (!check_finite(function, mu, "Location parameter",
                        &logp, Policy()))
        return logp;
      if (!check_finite(function, sigma, "Scale parameter", &logp, 
                        Policy()))
        return logp;
      if (!check_positive(function, sigma, "Scale parameter",
                          &logp, Policy()))
        return logp;
      if (!(check_consistent_sizes(function,
                                   y,mu,sigma,
                                   "Random variable","Location parameter","Scale parameter",
                                   &logp, Policy())))
        return logp;
 
      // check if no variables are involved and prop-to
      if (!include_summand<propto,T_y,T_loc,T_scale>::value)
        return 0.0;
 
 
      // set up template expressions wrapping scalars into vector views
      agrad::OperandsAndPartials<T_y, T_loc, T_scale> operands_and_partials(y, mu, sigma);
 
      VectorView<const T_y> y_vec(y);
      VectorView<const T_loc> mu_vec(mu);
      VectorView<const T_scale> sigma_vec(sigma);
      size_t N = max_size(y, mu, sigma);
 
      DoubleVectorView<true,T_scale> inv_sigma(length(sigma));
      DoubleVectorView<include_summand<propto,T_scale>::value,T_scale> log_sigma(length(sigma));
      for (size_t i = 0; i < length(sigma); i++) {
        inv_sigma[i] = 1.0 / value_of(sigma_vec[i]);
        if (include_summand<propto,T_scale>::value)
          log_sigma[i] = log(value_of(sigma_vec[i]));
      }
 
      DoubleVectorView<!is_constant_struct<T_loc>::value, double, is_vector<T_loc>::value || is_vector<T_scale>::value> 
        exp_mu_div_sigma(max_size(mu,sigma));
      DoubleVectorView<!is_constant_struct<T_loc>::value, double, is_vector<T_y>::value || is_vector<T_scale>::value> 
        exp_y_div_sigma(max_size(y,sigma));
      if (!is_constant_struct<T_loc>::value) {
        for (size_t n = 0; n < max_size(mu,sigma); n++) 
          exp_mu_div_sigma[n] = exp(value_of(mu_vec[n]) / value_of(sigma_vec[n]));
        for (size_t n = 0; n < max_size(y,sigma); n++) 
          exp_y_div_sigma[n] = exp(value_of(y_vec[n]) / value_of(sigma_vec[n]));
      }
 
      using stan::math::log1p;
      for (size_t n = 0; n < N; n++) {
        const double y_dbl = value_of(y_vec[n]);
        const double mu_dbl = value_of(mu_vec[n]);
        
        const double y_minus_mu = y_dbl - mu_dbl;
        const double y_minus_mu_div_sigma = y_minus_mu * inv_sigma[n];
        double exp_m_y_minus_mu_div_sigma(0);
        if (include_summand<propto,T_y,T_loc,T_scale>::value)
          exp_m_y_minus_mu_div_sigma = exp(-y_minus_mu_div_sigma);
        double inv_1p_exp_y_minus_mu_div_sigma(0);
        if (!is_constant_struct<T_y>::value || !is_constant_struct<T_scale>::value)
          inv_1p_exp_y_minus_mu_div_sigma = 1 / (1 + exp(y_minus_mu_div_sigma));
 
        if (include_summand<propto,T_y,T_loc,T_scale>::value)
          logp -= y_minus_mu_div_sigma;
        if (include_summand<propto,T_scale>::value)
          logp -= log_sigma[n];
        if (include_summand<propto,T_y,T_loc,T_scale>::value)
          logp -= 2.0 * log1p(exp_m_y_minus_mu_div_sigma);
 
        if (!is_constant_struct<T_y>::value)
          operands_and_partials.d_x1[n] += (2 * inv_1p_exp_y_minus_mu_div_sigma - 1) * inv_sigma[n];
        if (!is_constant_struct<T_loc>::value)
          operands_and_partials.d_x2[n] +=
            (1 - 2 * exp_mu_div_sigma[n] / (exp_mu_div_sigma[n] + exp_y_div_sigma[n])) * inv_sigma[n];
        if (!is_constant_struct<T_scale>::value)
          operands_and_partials.d_x3[n] += 
            ((1 - 2 * inv_1p_exp_y_minus_mu_div_sigma)*y_minus_mu*inv_sigma[n] - 1) * inv_sigma[n];
      }
      return operands_and_partials.to_var(logp);
    }
 
    template <bool propto,
              typename T_y, typename T_loc, typename T_scale>
    inline
    typename return_type<T_y,T_loc,T_scale>::type
    logistic_log(const T_y& y, const T_loc& mu, const T_scale& sigma) {
      return logistic_log<propto>(y,mu,sigma,stan::math::default_policy());
    }
 
    template <typename T_y, typename T_loc, typename T_scale,
              class Policy>
    inline
    typename return_type<T_y,T_loc,T_scale>::type
    logistic_log(const T_y& y, const T_loc& mu, const T_scale& sigma, 
                 const Policy&) {
      return logistic_log<false>(y,mu,sigma,Policy());
    }
 
    template <typename T_y, typename T_loc, typename T_scale>
    inline
    typename return_type<T_y,T_loc,T_scale>::type
    logistic_log(const T_y& y, const T_loc& mu, const T_scale& sigma) {
      return logistic_log<false>(y,mu,sigma,stan::math::default_policy());
    }
 
  }
}
#endif