Package: alignprimer
Version: 1.0-1
Architecture: amd64
Maintainer: Gerald Weber <gweberbh@gmail.com>
Installed-Size: 371
Depends: libboost-regex1.71.0-icu66, libc6 (>= 2.14), libgcc-s1 (>= 3.0), libstdc++6 (>= 9), zlib1g (>= 1:1.1.4)
Filename: amd64/alignprimer_1.0-1_amd64.deb
Size: 123196
MD5sum: 3a8f2d8fbf3025f865bf3e266b30b36a
SHA1: a6ef3a91516b66e0402ff3d9a9ee653585c22a82
SHA256: 5981510eabca19013c399c628e0e5933c21e0c33e6eefbe4dc3f6ec5ba869d84
Section: Physics
Priority: extra
Homepage: <https://sites.google.com/site/geraldweberufmg/AlignPrimer>
Description: Dynamic programming alignment of PCR primers to genomes

Package: tfreg
Version: 8.1-1
Architecture: amd64
Maintainer: Gerald Weber <gweberbh@gmail.com>
Installed-Size: 23832
Depends: libboost-filesystem1.71.0, libboost-iostreams1.71.0, libboost-regex1.71.0-icu66, libc6 (>= 2.29), libgcc-s1 (>= 3.0), libgsl23 (>= 2.5), liblapack3 | liblapack.so.3, libstdc++6 (>= 9)
Filename: amd64/tfreg_8.1-1_amd64.deb
Size: 7019204
MD5sum: f574fb40ba691d09e500b73b024eddf2
SHA1: 53a03a0b4fd9589a33d5c6d37a6e80feb571baae
SHA256: 954d1b98f19b3a34dc621e654a60b231e35d6d897e91433954a4143f95ff65b6
Section: Physics
Priority: extra
Homepage: <https://sites.google.com/site/geraldweberufmg/tfreg>
Description: TfReg implements the calculation of Peyrard-Bishop style Hamiltonians to obtain some physical properties of DNA and RNA duplexes. The method uses the transfer matrix technique for the calculation of the classical partition function. Also, TfReg calculates the regression of experimental versus predicted melting temperatures using the equivalent melting index.

Package: vargibbs
Version: 3.1-1
Architecture: amd64
Maintainer: Gerald Weber <gweberbh@gmail.com>
Installed-Size: 28566
Depends: libboost-filesystem1.71.0, libboost-iostreams1.71.0, libboost-regex1.71.0-icu66, libc6 (>= 2.29), libgcc-s1 (>= 3.0), libgsl23 (>= 2.5), libstdc++6 (>= 9)
Filename: amd64/vargibbs_3.1-1_amd64.deb
Size: 6662536
MD5sum: 756d434050255ef08be0bfb13f9558b1
SHA1: dfacee340c13eae64b36cd50b7985620648f7e58
SHA256: bb6be77566d08b7df06f57112221a4f6705d4d61798318d6a68f18ff6d53e575
Section: Physics
Priority: extra
Homepage: <https://sites.google.com/site/geraldweberufmg/vargibbs>
Description: Minimization method for calculating DNA nearest-neighbour thermodynamic parameters