Package: alignprimer
Version: 1.0-1
Architecture: amd64
Maintainer: Gerald Weber <gweberbh@gmail.com>
Installed-Size: 391
Depends: libboost-regex1.74.0-icu67, libc6 (>= 2.14), libgcc-s1 (>= 3.0), libstdc++6 (>= 9), zlib1g (>= 1:1.1.4)
Filename: amd64/alignprimer_1.0-1_amd64.deb
Size: 128152
MD5sum: bbe6592d05cf42cf61fba8d4ebdab159
SHA1: b8a855875d1de460213cc88bc7563b410d143c24
SHA256: 8679d5363a6d864babcfe1f4845fa0fd18e020a9de21e0f7b16a91d63f853f72
Section: Physics
Priority: extra
Homepage: <https://sites.google.com/site/geraldweberufmg/AlignPrimer>
Description: Dynamic programming alignment of PCR primers to genomes

Package: tfreg
Version: 8.1-1
Architecture: amd64
Maintainer: Gerald Weber <gweberbh@gmail.com>
Installed-Size: 23854
Depends: libboost-filesystem1.74.0 (>= 1.74.0), libboost-iostreams1.74.0 (>= 1.74.0), libboost-regex1.74.0-icu67, libc6 (>= 2.29), libgcc-s1 (>= 3.0), libgsl25 (>= 2.6), liblapack3 | liblapack.so.3, libstdc++6 (>= 9)
Filename: amd64/tfreg_8.1-1_amd64.deb
Size: 7040948
MD5sum: 50fa78092a43da9d89c289281d378c5a
SHA1: c096a27a85c47230903a91981c1d86d015d2602c
SHA256: 82ef72eeca0315157c1ce4a87cbdc10867cebd1c7383945a61840bde1552f8ba
Section: Physics
Priority: extra
Homepage: <https://sites.google.com/site/geraldweberufmg/tfreg>
Description: TfReg implements the calculation of Peyrard-Bishop style Hamiltonians to obtain some physical properties of DNA and RNA duplexes. The method uses the transfer matrix technique for the calculation of the classical partition function. Also, TfReg calculates the regression of experimental versus predicted melting temperatures using the equivalent melting index.

Package: vargibbs
Version: 4.1-1
Architecture: amd64
Maintainer: Gerald Weber <gweberbh@gmail.com>
Installed-Size: 30794
Depends: libboost-filesystem1.74.0 (>= 1.74.0), libboost-iostreams1.74.0 (>= 1.74.0), libboost-regex1.74.0-icu67, libc6 (>= 2.29), libgcc-s1 (>= 3.0), libgsl25 (>= 2.6), libstdc++6 (>= 9)
Filename: amd64/vargibbs_4.1-1_amd64.deb
Size: 6882396
MD5sum: fbb4088177b7338d9fae401265ab61b9
SHA1: ccf125cc8c0773c5ec320db376a72cca8a363d47
SHA256: 04ccb263089f3d594348c76c7235151a68f30d024ba9c7eaa2862dc3da5ee5a7
Section: Physics
Priority: extra
Homepage: <https://sites.google.com/site/geraldweberufmg/vargibbs>
Description: Minimization method for calculating DNA nearest-neighbour thermodynamic parameters